Product Description: basal complex transmembrane protein 2
SignalP Peptide: N/A
# Transmembrane Domains: 7
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0045178 | basal part of cell |
Component | GO:0070258 | inner membrane pellicle complex |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | expressed | N/A | N/A |
Ring | not expressed | 0.22 | 0.90 |
Trophozoite | possibly expressed | 0.75 | 0.67 |
Schizont | expressed | 2.30 | 0.25 |
Gametocyte | expressed | 1.78 | 0.33 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0704100
Resistome Missense Mutations: T3415I
Resistome Compounds with Missense Mutations: MMV665794
Resistome # Samples with Disruptive Mutations: 1 (1 missense, 1 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -2.004 | #Insertions: 3
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 42 | 182 | 110 | 218 |
disruptive | 192 | 667 | 332 | 816 |
missense | 107 | 537 | 290 | 657 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 78 | 348 | 164 | 253 |
disruptive | 385 | 1329 | 576 | 1093 |
missense | 207 | 1036 | 471 | 707 |
PlasmoDB Total SNPs: 621
Non-coding: 61 | Synonymous: 306 | Nonsynonymous: 248 | Stop Codon: 6
Protein Length: 3559 | Molecular Weight (kDa): 425.265
UniProt ID(s): C0H4K4
PDB ID(s): None
Isoelectric Point: 9.17
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |
31097714 | An essential contractile ring protein controls cell division in Plasmodiumfalciparum. | Rudlaff RM, Kraemer S, Streva VA, Dvorin JD | 10.1038/s41467-019-10214-z |
38010088 | Hydrogen prevents lipopolysaccharide-induced pulmonary microvascular endothelialcell injury by inhibiting store-operated Ca2+ entry regulated by STIM1/Orai1 | Li Y, Chen H, ..., Yin Y | 10.1097/SHK.0000000000002279 |