Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | possibly expressed | 0.04 | 0.98 |
Trophozoite | expressed | 0.20 | 0.88 |
Schizont | possibly expressed | 0.09 | 0.94 |
Gametocyte | possibly expressed | 0.21 | 0.88 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0705200
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.153 | MFS: -2.901 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IC18
"Best" AlphaFill ligand hit: CTP (cytidine-5'-triphosphate, Local RMSD=7.88) with 7ECD (Global RMSD=15.00)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 14 | 80 | 52 | 82 |
disruptive | 62 | 237 | 131 | 338 |
missense | 43 | 214 | 122 | 298 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 25 | 161 | 61 | 127 |
disruptive | 109 | 599 | 244 | 637 |
missense | 76 | 497 | 193 | 372 |
PlasmoDB Total SNPs: 219
Non-coding: 54 | Synonymous: 95 | Nonsynonymous: 69 | Stop Codon: 1
Protein Length: 1532 | Molecular Weight (kDa): 186.414
UniProt ID(s): Q8IC18
PDB ID(s): None
Isoelectric Point: 9.08
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
No associated publications