About Gene List

PF3D7_0710300

Genome location: Pf3D7_07_v3:472,306..474,069(-)

Genome classification: Core

Function and Localization

Product Description: conserved protein, unknown function

SignalP Peptide: MNCFVLFVIVVALVTILDQCKQ

# Transmembrane Domains: 6

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0020011 apicoplast

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite possibly expressed N/A N/A
Ring expressed 0.03 0.98
Trophozoite expressed 0.15 0.91
Schizont expressed 0.02 0.99
Gametocyte expressed 0.07 0.96

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0710300

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.146 | MFS: -3.538 | #Insertions: 0

PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1220900)

  • Relative Growth Rate: 0.83 ± 0.17
  • Confidence: 4.96

RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1220900)

Modification: Disrupted | RMgm-3277

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C0H4M5

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_139508

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 6 9 10 10
disruptive 1 2 8 21
missense 1 2 8 20

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 6 25 6 15
disruptive 3 34 20 36
missense 1 22 19 29

PlasmoDB Total SNPs: 97

Non-coding: 85 | Synonymous: 10 | Nonsynonymous: 2 | Stop Codon: 0

Protein Information

Protein Length: 203 | Molecular Weight (kDa): 23.833

UniProt ID(s): C0H4M5, D0VEH1

PDB ID(s): None

Isoelectric Point: 9.66

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
30212465 Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. Boucher MJ, Ghosh S, ..., Yeh E 10.1371/journal.pbio.2005895