About Gene List

PF3D7_0710500

Genome location: Pf3D7_07_v3:475,796..477,592(-)

Genome classification: Core

Function and Localization

Product Description: conserved protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 1

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0020011 apicoplast

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.05 0.98
Trophozoite expressed 0.23 0.86
Schizont possibly expressed 0.02 0.99
Gametocyte expressed 0.32 0.80

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0710500

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.125 | MFS: -3.156 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IBY5

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_139507

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 5 13 9 17
disruptive 3 14 7 29
missense 3 11 7 27

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 6 24 13 19
disruptive 9 40 19 61
missense 5 31 15 41

PlasmoDB Total SNPs: 136

Non-coding: 118 | Synonymous: 14 | Nonsynonymous: 3 | Stop Codon: 1

Protein Information

Protein Length: 255 | Molecular Weight (kDa): 30.266

UniProt ID(s): Q8IBY5

PDB ID(s): None

Isoelectric Point: 9.85

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
30212465 Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. Boucher MJ, Ghosh S, ..., Yeh E 10.1371/journal.pbio.2005895