Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 2
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.38 | 0.81 |
Trophozoite | not expressed | 0.22 | 0.86 |
Schizont | not expressed | 0.19 | 0.88 |
Gametocyte | not expressed | 0.53 | 0.74 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0713500
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -2.544 | #Insertions: 2
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IBW2
"Best" AlphaFill ligand hit: PH2 (2-amino-6-hydroxymethyl-7,8-dihydro-3h-pteridin-4-one, Local RMSD=0.76) with 6JWR (Global RMSD=20.35)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 26 | 38 | 15 | 29 |
disruptive | 50 | 71 | 42 | 114 |
missense | 44 | 66 | 38 | 101 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 31 | 55 | 22 | 43 |
disruptive | 78 | 145 | 72 | 176 |
missense | 62 | 119 | 61 | 126 |
PlasmoDB Total SNPs: 249
Non-coding: 146 | Synonymous: 58 | Nonsynonymous: 45 | Stop Codon: 0
Protein Length: 954 | Molecular Weight (kDa): 115.883
UniProt ID(s): Q8IBW2
PDB ID(s): None
Isoelectric Point: 9.14
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
No associated publications