Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: MFKKFFVFITFLVFIIKYIHC
# Transmembrane Domains: 2
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0005634 | nucleus |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | possibly expressed | 0.03 | 0.98 |
Trophozoite | possibly expressed | 0.12 | 0.92 |
Schizont | expressed | 0.07 | 0.94 |
Gametocyte | expressed | 0.07 | 0.95 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0713700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.153 | MFS: -3.211 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_1420300)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H4M7
"Best" AlphaFill ligand hit: AMP (adenosine monophosphate, Local RMSD=0.82) with 4NNJ (Global RMSD=21.07)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 0 | 5 | 2 | 15 |
disruptive | 6 | 8 | 6 | 13 |
missense | 6 | 8 | 5 | 13 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 1 | 17 | 8 | 20 |
disruptive | 7 | 34 | 15 | 71 |
missense | 7 | 20 | 13 | 46 |
PlasmoDB Total SNPs: 178
Non-coding: 159 | Synonymous: 12 | Nonsynonymous: 7 | Stop Codon: 0
Protein Length: 209 | Molecular Weight (kDa): 24.381
UniProt ID(s): C0H4M7
PDB ID(s): None
Isoelectric Point: 5.03
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
30379851 | Identification of Plasmodium falciparum nuclear proteins by mass spectrometry andproposed protein annotation. | Briquet S, Ourimi A, ..., Vaquero C | 10.1371/journal.pone.0205596 |