Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: MSHNPASILLFTVQGLLA
# Transmembrane Domains: 1
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0020011 | apicoplast |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.12 | 0.94 |
Trophozoite | expressed | 0.91 | 0.55 |
Schizont | expressed | 1.13 | 0.47 |
Gametocyte | expressed | 1.90 | 0.25 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0715200
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -2.289 | #Insertions: 8
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1421500)
Modification: Disrupted | RMgm-3843
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IBU8
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 18 | 90 | 36 | 111 |
disruptive | 120 | 273 | 150 | 319 |
missense | 69 | 191 | 122 | 253 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 35 | 156 | 73 | 124 |
disruptive | 182 | 582 | 265 | 558 |
missense | 101 | 429 | 208 | 332 |
PlasmoDB Total SNPs: 471
Non-coding: 74 | Synonymous: 195 | Nonsynonymous: 201 | Stop Codon: 1
Protein Length: 2206 | Molecular Weight (kDa): 258.401
UniProt ID(s): Q8IBU8
PDB ID(s): None
Isoelectric Point: 6.47
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
30212465 | Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. | Boucher MJ, Ghosh S, ..., Yeh E | 10.1371/journal.pbio.2005895 |