About Gene List

PF3D7_0715400 (PSOP20)

Genome location: Pf3D7_07_v3:687,618..689,135(-)

Genome classification: Core

Function and Localization

Product Description: secreted ookinete protein, putative

SignalP Peptide: MNKMNKIICLMLYVSLINLTQS

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0020011 apicoplast

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite possibly expressed N/A N/A
Ring not expressed 0.02 0.99
Trophozoite expressed 0.10 0.94
Schizont expressed 0.04 0.97
Gametocyte expressed 0.63 0.74

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0715400

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 1 | MFS: -2.83 | #Insertions: 4

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1421700)

Modification: Disrupted | RMgm-3845

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: A0A143ZXA3

"Best" AlphaFill ligand hit: NDP (nadph dihydro-nicotinamide-adenine-dinucleotide phosphate, Local RMSD=0.62) with 6LH9 (Global RMSD=21.11)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_533276

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 3 13 5 12
disruptive 3 12 6 23
missense 1 11 6 20

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 6 25 9 13
disruptive 6 35 26 51
missense 3 22 23 40

PlasmoDB Total SNPs: 86

Non-coding: 75 | Synonymous: 9 | Nonsynonymous: 1 | Stop Codon: 1

Protein Information

Protein Length: 219 | Molecular Weight (kDa): 25.691

UniProt ID(s): A0A143ZXA3

PDB ID(s): None

Isoelectric Point: 8.38

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
30212465 Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. Boucher MJ, Ghosh S, ..., Yeh E 10.1371/journal.pbio.2005895