Product Description: inner membrane complex protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0070258 | inner membrane pellicle complex |
Component | GO:0005634 | nucleus |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.11 | 0.94 |
Trophozoite | not expressed | 0.78 | 0.60 |
Schizont | possibly expressed | 1.46 | 0.38 |
Gametocyte | expressed | 1.68 | 0.36 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0717600
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.329 | MFS: -2.592 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_0615300)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: A0A143ZVJ7
"Best" AlphaFill ligand hit: FAR (farnesyl, Local RMSD=1.06) with 6K1Z (Global RMSD=25.74)
No associated EC numbersNo evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_119267
Most Similar Human Ortholog: H0YBP4
TM-align score: 0.81 | RMSD: 1.50
Seq Identity: 0.07 | Length: 43 / 1053
All Human Orthologs (OrthoMCL):
Gene ID | Description |
---|---|
ENSG00000136436 | calcium binding and coiled-coil domain 2 |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 38 | 22 | 49 |
disruptive | 14 | 50 | 41 | 115 |
missense | 11 | 49 | 40 | 94 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 12 | 74 | 38 | 57 |
disruptive | 33 | 181 | 99 | 259 |
missense | 19 | 147 | 83 | 162 |
PlasmoDB Total SNPs: 237
Non-coding: 188 | Synonymous: 32 | Nonsynonymous: 17 | Stop Codon: 0
Protein Length: 1053 | Molecular Weight (kDa): 125.439
UniProt ID(s): A0A143ZVJ7
PDB ID(s): None
Isoelectric Point: 8.1
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
23181666 | Organellar proteomics reveals hundreds of novel nuclear proteins in the malariaparasite Plasmodium falciparum. | Oehring SC, Woodcroft BJ, ..., Voss TS | 10.1186/gb-2012-13-11-r108 |
33593973 | Identification and Molecular Dissection of I MC32, a Conserved Toxoplasma Inner Membrane Complex Protein That Is Essential for Parasite Replication | Torres JA, Pasquarelli RR, ..., Bradley PJ | 10.1128/mBio.03622-20 |
37782662 | Identification of IMC43, a novel IMC protein that collaborates with IMC32 to forman essential daughter bud assembly complex in Toxoplasma gondii | Pasquarelli RR, Back PS, ..., Bradley PJ | 10.1371/journal.ppat.1011707 |