Product Description: conserved Plasmodium membrane protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 4
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0005802 | trans-Golgi network |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | expressed | 0.87 | 0.63 |
Trophozoite | possibly expressed | 1.52 | 0.33 |
Schizont | expressed | 0.95 | 0.55 |
Gametocyte | possibly expressed | 1.29 | 0.38 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0719900
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 4 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.165 | MFS: -2.803 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 49 | 160 | 84 | 182 |
disruptive | 325 | 535 | 273 | 594 |
missense | 132 | 315 | 207 | 424 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 82 | 262 | 135 | 185 |
disruptive | 485 | 890 | 382 | 753 |
missense | 189 | 588 | 295 | 491 |
PlasmoDB Total SNPs: 498
Non-coding: 27 | Synonymous: 241 | Nonsynonymous: 230 | Stop Codon: 0
Protein Length: 3401 | Molecular Weight (kDa): 402.702
UniProt ID(s): Q8IBQ3
PDB ID(s): None
Isoelectric Point: 8.43
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR013935 | TRAPP II complex, Trs120 |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |