Product Description: conserved protein, unknown function
SignalP Peptide: MRLDLFLLFCVSPCLYTFFVKG
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | possibly expressed | 0.01 | 0.99 |
Trophozoite | possibly expressed | 0.02 | 0.99 |
Schizont | not expressed | 0.04 | 0.98 |
Gametocyte | expressed | 0.96 | 0.59 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0722800
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.998 | MFS: -2.575 | #Insertions: 1
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_0620300)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0620300)
Modification: Disrupted | RMgm-2149
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IBM5
"Best" AlphaFill ligand hit: GDP (guanosine-5'-diphosphate, Local RMSD=1.86) with 7CDW (Global RMSD=24.88)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 24 | 16 | 35 |
disruptive | 3 | 37 | 19 | 68 |
missense | 3 | 36 | 18 | 66 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 46 | 30 | 45 |
disruptive | 8 | 75 | 42 | 110 |
missense | 6 | 65 | 35 | 82 |
PlasmoDB Total SNPs: 25
Non-coding: 0 | Synonymous: 19 | Nonsynonymous: 6 | Stop Codon: 0
Protein Length: 579 | Molecular Weight (kDa): 66.302
UniProt ID(s): Q8IBM5
PDB ID(s): None
Isoelectric Point: 8.22
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
No associated publications