Product Description: conserved protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0070258 | inner membrane pellicle complex |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | expressed | N/A | N/A |
Ring | possibly expressed | 0.01 | 1.00 |
Trophozoite | possibly expressed | 0.02 | 0.99 |
Schizont | possibly expressed | 0.21 | 0.86 |
Gametocyte | expressed | 0.56 | 0.73 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0722900
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.666 | MFS: -2.366 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IBM4
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 1 | 18 | 10 | 21 |
disruptive | 1 | 19 | 11 | 35 |
missense | 1 | 19 | 9 | 33 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 3 | 29 | 15 | 18 |
disruptive | 11 | 36 | 17 | 51 |
missense | 4 | 33 | 16 | 41 |
PlasmoDB Total SNPs: 180
Non-coding: 171 | Synonymous: 5 | Nonsynonymous: 4 | Stop Codon: 0
Protein Length: 312 | Molecular Weight (kDa): 36.863
UniProt ID(s): Q8IBM4
PDB ID(s): None
Isoelectric Point: 10.35
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
25691595 | Novel components of the Toxoplasma inner membrane complex revealed by BioID. | Chen AL, Kim EW, ..., Bradley PJ | 10.1128/mBio.02357-14 |