Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: MKMKKIIIFVLFYFITPKLC
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | possibly expressed | 0.00 | 1.00 |
Trophozoite | possibly expressed | 0.00 | 1.00 |
Schizont | expressed | 0.03 | 0.98 |
Gametocyte | expressed | 0.06 | 0.96 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0723200
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.885 | MFS: -1.844 | #Insertions: 0
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_0620700)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0620700)
Modification: Disrupted | RMgm-4221
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IBM1
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 18 | 8 | 23 |
disruptive | 2 | 12 | 8 | 25 |
missense | 2 | 12 | 8 | 22 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 35 | 20 | 24 |
disruptive | 5 | 33 | 21 | 71 |
missense | 3 | 25 | 18 | 59 |
PlasmoDB Total SNPs: 43
Non-coding: 35 | Synonymous: 5 | Nonsynonymous: 3 | Stop Codon: 0
Protein Length: 358 | Molecular Weight (kDa): 41.027
UniProt ID(s): Q8IBM1
PDB ID(s): None
Isoelectric Point: 7.65
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
PFam | PF13385 | N/A |
Superfamily | SSF49899 | Concanavalin A-like lectin/glucanase domain superfamily |
No associated publications