Product Description: conserved Plasmodium membrane protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 5
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | expressed | 0.28 | 0.86 |
Trophozoite | possibly expressed | 0.54 | 0.69 |
Schizont | not expressed | 0.50 | 0.69 |
Gametocyte | possibly expressed | 0.35 | 0.80 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0725100
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.121 | MFS: -3.078 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IBK0
"Best" AlphaFill ligand hit: OCT (n-octane, Local RMSD=0.19) with 6JO0 (Global RMSD=19.20)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 11 | 68 | 36 | 63 |
disruptive | 194 | 252 | 132 | 284 |
missense | 97 | 214 | 116 | 241 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 23 | 124 | 47 | 80 |
disruptive | 253 | 521 | 201 | 388 |
missense | 131 | 426 | 161 | 258 |
PlasmoDB Total SNPs: 403
Non-coding: 129 | Synonymous: 94 | Nonsynonymous: 180 | Stop Codon: 0
Protein Length: 1576 | Molecular Weight (kDa): 190.799
UniProt ID(s): Q8IBK0
PDB ID(s): None
Isoelectric Point: 9.01
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
No associated publications