Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: MCFLKYFIFSLIWIFLYNEKAKD
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | expressed | N/A | N/A |
| Ring | expressed | 0.79 | 0.77 |
| Trophozoite | expressed | 0.09 | 0.95 |
| Schizont | expressed | 0.95 | 0.66 |
| Gametocyte | expressed | 0.07 | 0.96 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0725400
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS *tentative
MIS: 0.12 | MFS: -3.651 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IBJ7
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 4 | 3 | 3 | 3 |
| disruptive | 2 | 6 | 2 | 12 |
| missense | 2 | 6 | 2 | 8 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 5 | 7 | 3 | 5 |
| disruptive | 8 | 11 | 11 | 35 |
| missense | 6 | 5 | 6 | 18 |
PlasmoDB Total SNPs: 82
Non-coding: 75 | Synonymous: 6 | Nonsynonymous: 1 | Stop Codon: 0
Protein Length: 109 | Molecular Weight (kDa): 13
UniProt ID(s): Q8IBJ7
PDB ID(s): None
Isoelectric Point: 10.32
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |