Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: MKIFLLCFALLFVPYKCLI
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
| Type | GO Term | Name |
|---|---|---|
| Component | GO:0020011 | apicoplast |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | not expressed | 0.05 | 0.97 |
| Trophozoite | not expressed | 0.49 | 0.72 |
| Schizont | not expressed | 0.51 | 0.70 |
| Gametocyte | possibly expressed | 0.69 | 0.64 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0726700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.308 | MFS: -3.436 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IBI9
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 3 | 9 | 4 | 13 |
| disruptive | 1 | 9 | 5 | 22 |
| missense | 1 | 9 | 5 | 21 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 6 | 16 | 10 | 18 |
| disruptive | 3 | 27 | 21 | 36 |
| missense | 3 | 23 | 16 | 28 |
PlasmoDB Total SNPs: 21
Non-coding: 15 | Synonymous: 3 | Nonsynonymous: 3 | Stop Codon: 0
Protein Length: 170 | Molecular Weight (kDa): 20.395
UniProt ID(s): Q8IBI9
PDB ID(s): None
Isoelectric Point: 10.62
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 30212465 | Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. | Boucher MJ, Ghosh S, ..., Yeh E | 10.1371/journal.pbio.2005895 |