Product Description: conserved protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0020011 | apicoplast |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | expressed | N/A | N/A |
Ring | expressed | 0.07 | 0.97 |
Trophozoite | expressed | 0.44 | 0.73 |
Schizont | expressed | 0.18 | 0.88 |
Gametocyte | expressed | 0.31 | 0.81 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0727100
Resistome Missense Mutations: S837G, Q853R
Resistome Compounds with Missense Mutations: AN13762, AN13956, MMV665794
Resistome # Samples with Disruptive Mutations: 12 (11 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.368 | MFS: -2.49 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_0211200)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H4P6
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 12 | 48 | 24 | 48 |
disruptive | 85 | 185 | 83 | 194 |
missense | 29 | 98 | 43 | 121 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 23 | 85 | 36 | 67 |
disruptive | 138 | 344 | 144 | 323 |
missense | 50 | 186 | 77 | 174 |
PlasmoDB Total SNPs: 297
Non-coding: 63 | Synonymous: 93 | Nonsynonymous: 138 | Stop Codon: 3
Protein Length: 1066 | Molecular Weight (kDa): 127.071
UniProt ID(s): C0H4P6
PDB ID(s): None
Isoelectric Point: 5.13
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
30212465 | Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. | Boucher MJ, Ghosh S, ..., Yeh E | 10.1371/journal.pbio.2005895 |