About Gene List

PF3D7_0727100

Genome location: Pf3D7_07_v3:1,151,697..1,155,473(-)

Genome classification: Core

Function and Localization

Product Description: conserved protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0020011 apicoplast

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite expressed N/A N/A
Ring expressed 0.07 0.97
Trophozoite expressed 0.44 0.73
Schizont expressed 0.18 0.88
Gametocyte expressed 0.31 0.81

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0727100

Resistome Missense Mutations: S837G, Q853R

Resistome Compounds with Missense Mutations: AN13762, AN13956, MMV665794

Resistome # Samples with Disruptive Mutations: 12 (11 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.368 | MFS: -2.49 | #Insertions: 0

PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_0211200)

  • Relative Growth Rate: 0.06 ± 0.03
  • Confidence: 8.24

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C0H4P6

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_156427

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 12 48 24 48
disruptive 85 185 83 194
missense 29 98 43 121

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 23 85 36 67
disruptive 138 344 144 323
missense 50 186 77 174

PlasmoDB Total SNPs: 297

Non-coding: 63 | Synonymous: 93 | Nonsynonymous: 138 | Stop Codon: 3

Protein Information

Protein Length: 1066 | Molecular Weight (kDa): 127.071

UniProt ID(s): C0H4P6

PDB ID(s): None

Isoelectric Point: 5.13

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
30212465 Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. Boucher MJ, Ghosh S, ..., Yeh E 10.1371/journal.pbio.2005895