Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | possibly expressed | 0.06 | 0.97 |
| Trophozoite | expressed | 0.36 | 0.78 |
| Schizont | expressed | 0.13 | 0.92 |
| Gametocyte | possibly expressed | 0.28 | 0.84 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0727700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.126 | MFS: -2.95 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_0211800)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IBI0
"Best" AlphaFill ligand hit: BMF (bromosporine, Local RMSD=0.54) with 5U9N (Global RMSD=16.77)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 10 | 63 | 27 | 69 |
| disruptive | 46 | 196 | 100 | 203 |
| missense | 34 | 171 | 95 | 172 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 18 | 112 | 52 | 76 |
| disruptive | 91 | 390 | 129 | 273 |
| missense | 64 | 325 | 108 | 204 |
PlasmoDB Total SNPs: 177
Non-coding: 60 | Synonymous: 59 | Nonsynonymous: 58 | Stop Codon: 0
Protein Length: 956 | Molecular Weight (kDa): 114.829
UniProt ID(s): Q8IBI0
PDB ID(s): None
Isoelectric Point: 9.53
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
No associated publications