Product Description: cation transporting ATPase, putative
SignalP Peptide: N/A
# Transmembrane Domains: 12
EC Numbers: 3.6.3.12 (Transferred entry: 7.2.2.6)
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0016021 | integral component of membrane |
Component | GO:0016020 | membrane |
Process | GO:0006874 | cellular calcium ion homeostasis |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.32 | 0.85 |
Trophozoite | not expressed | 1.20 | 0.41 |
Schizont | possibly expressed | 0.40 | 0.78 |
Gametocyte | possibly expressed | 0.77 | 0.59 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0727800
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.139 | MFS: -2.826 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_0211900)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IBH9
"Best" AlphaFill ligand hit: CE1 (o-dodecanyl octaethylene glycol, Local RMSD=0.31) with 6ZHH (Global RMSD=6.40)
BRENDA EC Inhibitors:
EC # | Name | EC Inhibitors |
---|---|---|
3.6.3.12 | K+-transporting ATPase | No BRENDA inhibitors |
No evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_101914
Most Similar Human Ortholog: Q9HD20
TM-align score: 0.76 | RMSD: 4.20
Seq Identity: 0.33 | Length: 1005 / 1918
All Human Orthologs (OrthoMCL):
Gene ID | Description |
---|---|
ENSG00000105726 | ATPase 13A1 |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 30 | 122 | 75 | 131 |
disruptive | 77 | 248 | 125 | 302 |
missense | 56 | 215 | 118 | 273 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 58 | 221 | 97 | 148 |
disruptive | 124 | 505 | 245 | 460 |
missense | 87 | 431 | 205 | 354 |
PlasmoDB Total SNPs: 293
Non-coding: 58 | Synonymous: 126 | Nonsynonymous: 107 | Stop Codon: 2
Protein Length: 1918 | Molecular Weight (kDa): 225.077
UniProt ID(s): Q8IBH9
PDB ID(s): None
Isoelectric Point: 8.64
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR008250 | P-type ATPase, A domain superfamily |
InterPro | IPR018303 | P-type ATPase, phosphorylation site |
InterPro | IPR023298 | P-type ATPase, transmembrane domain superfamily |
InterPro | IPR023299 | P-type ATPase, cytoplasmic domain N |
InterPro | IPR036412 | HAD-like superfamily |
PFam | N/A | N/A |
Superfamily | SSF56784 | HAD-like superfamily |
Superfamily | SSF81653 | P-type ATPase, A domain superfamily |
Superfamily | SSF81660 | P-type ATPase, cytoplasmic domain N |
Superfamily | SSF81665 | P-type ATPase, transmembrane domain superfamily |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
11152613 | Predicting transmembrane protein topology with a hidden Markov model: applicationto complete genomes. | Krogh A, Larsson B, von Heijne G, Sonnhammer EL | 10.1006/jmbi.2000.4315 |