About Gene List

PF3D7_0727800

Genome location: Pf3D7_07_v3:1,175,363..1,181,839(+)

Genome classification: Core

Function and Localization

Product Description: cation transporting ATPase, putative

SignalP Peptide: N/A

# Transmembrane Domains: 12

EC Numbers: 3.6.3.12 (Transferred entry: 7.2.2.6)

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0016021 integral component of membrane
Component GO:0016020 membrane
Process GO:0006874 cellular calcium ion homeostasis

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.32 0.85
Trophozoite not expressed 1.20 0.41
Schizont possibly expressed 0.40 0.78
Gametocyte possibly expressed 0.77 0.59

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0727800

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.139 | MFS: -2.826 | #Insertions: 0

PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_0211900)

  • Relative Growth Rate: 0.10 ± 0.46
  • Confidence: 1.00

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IBH9

"Best" AlphaFill ligand hit: CE1 (o-dodecanyl octaethylene glycol, Local RMSD=0.31) with 6ZHH (Global RMSD=6.40)

BRENDA EC Inhibitors:

EC # Name EC Inhibitors
3.6.3.12 K+-transporting ATPase No BRENDA inhibitors

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_101914

Most Similar Human Ortholog: Q9HD20

TM-align score: 0.76 | RMSD: 4.20

Seq Identity: 0.33 | Length: 1005 / 1918

All Human Orthologs (OrthoMCL):

Gene ID Description
ENSG00000105726 ATPase 13A1

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 30 122 75 131
disruptive 77 248 125 302
missense 56 215 118 273

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 58 221 97 148
disruptive 124 505 245 460
missense 87 431 205 354

PlasmoDB Total SNPs: 293

Non-coding: 58 | Synonymous: 126 | Nonsynonymous: 107 | Stop Codon: 2

Protein Information

Protein Length: 1918 | Molecular Weight (kDa): 225.077

UniProt ID(s): Q8IBH9

PDB ID(s): None

Isoelectric Point: 8.64

Protein Domain Annotations:

Source Family ID Description
InterPro IPR008250 P-type ATPase, A domain superfamily
InterPro IPR018303 P-type ATPase, phosphorylation site
InterPro IPR023298 P-type ATPase, transmembrane domain superfamily
InterPro IPR023299 P-type ATPase, cytoplasmic domain N
InterPro IPR036412 HAD-like superfamily
PFam N/A N/A
Superfamily SSF56784 HAD-like superfamily
Superfamily SSF81653 P-type ATPase, A domain superfamily
Superfamily SSF81660 P-type ATPase, cytoplasmic domain N
Superfamily SSF81665 P-type ATPase, transmembrane domain superfamily

Associated Publications

PMID Title Authors DOI/Link
11152613 Predicting transmembrane protein topology with a hidden Markov model: applicationto complete genomes. Krogh A, Larsson B, von Heijne G, Sonnhammer EL 10.1006/jmbi.2000.4315