About Gene List

PF3D7_0728800

Genome location: Pf3D7_07_v3:1,230,145..1,232,666(+)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: MICLIFYVLFVLLLQDIIIW

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0020011 apicoplast

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite expressed N/A N/A
Ring not expressed 0.15 0.93
Trophozoite expressed 1.08 0.45
Schizont expressed 0.25 0.85
Gametocyte possibly expressed 0.65 0.65

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0728800

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.126 | MFS: -3.068 | #Insertions: 0

PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_0212900)

  • Relative Growth Rate: 0.09 ± 0.07
  • Confidence: 6.83

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IBH0

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_533643

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 4 21 12 25
disruptive 29 72 35 98
missense 17 63 32 79

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 8 43 13 29
disruptive 51 142 53 146
missense 31 122 45 100

PlasmoDB Total SNPs: 181

Non-coding: 142 | Synonymous: 17 | Nonsynonymous: 22 | Stop Codon: 0

Protein Information

Protein Length: 466 | Molecular Weight (kDa): 55.748

UniProt ID(s): Q8IBH0

PDB ID(s): None

Isoelectric Point: 7.97

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
30212465 Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. Boucher MJ, Ghosh S, ..., Yeh E 10.1371/journal.pbio.2005895