Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: MICLIFYVLFVLLLQDIIIW
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0020011 | apicoplast |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | expressed | N/A | N/A |
Ring | not expressed | 0.15 | 0.93 |
Trophozoite | expressed | 1.08 | 0.45 |
Schizont | expressed | 0.25 | 0.85 |
Gametocyte | possibly expressed | 0.65 | 0.65 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0728800
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.126 | MFS: -3.068 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_0212900)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IBH0
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 21 | 12 | 25 |
disruptive | 29 | 72 | 35 | 98 |
missense | 17 | 63 | 32 | 79 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 8 | 43 | 13 | 29 |
disruptive | 51 | 142 | 53 | 146 |
missense | 31 | 122 | 45 | 100 |
PlasmoDB Total SNPs: 181
Non-coding: 142 | Synonymous: 17 | Nonsynonymous: 22 | Stop Codon: 0
Protein Length: 466 | Molecular Weight (kDa): 55.748
UniProt ID(s): Q8IBH0
PDB ID(s): None
Isoelectric Point: 7.97
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
30212465 | Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. | Boucher MJ, Ghosh S, ..., Yeh E | 10.1371/journal.pbio.2005895 |