Genome location: Pf3D7_08_v3:65,153..74,000(-)
Genome classification: SubtelomericHypervariable
Product Description: surface-associated interspersed protein 8.3 (SURFIN 8.3)
SignalP Peptide: N/A
# Transmembrane Domains: 1
EC Numbers: None
Curated GO (PlasmoDB):
| Type | GO Term | Name |
|---|---|---|
| Component | GO:0009986 | cell surface |
| Component | GO:0044228 | host cell surface |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | not expressed | 0.04 | 0.98 |
| Trophozoite | possibly expressed | 0.06 | 0.97 |
| Schizont | not expressed | 0.09 | 0.94 |
| Gametocyte | possibly expressed | 0.16 | 0.91 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0800700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 4 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -1.181 | #Insertions: 7
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: A0A143ZWG8
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
No passing variants found
PlasmoDB Total SNPs: 742
Non-coding: 208 | Synonymous: 250 | Nonsynonymous: 281 | Stop Codon: 3
Protein Length: 1925 | Molecular Weight (kDa): 235.057
UniProt ID(s): A0A143ZWG8, A0A1Y1CDI6, A0A1Y1CE47, A0A1Y1CED9, A0A348FV61, A0A348FV76
PDB ID(s): None
Isoelectric Point: 5.24
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | IPR024288 | Schizont-infected cell agglutination, C-terminal domain |
| PFam | PF12879 | Schizont-infected cell agglutination, C-terminal domain |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 15939796 | SURFIN is a polymorphic antigen expressed on Plasmodium falciparum merozoites andinfected erythrocytes. | Winter G, Kawai S, ..., Wahlgren M | 10.1084/jem.20041392 |