Product Description: CH domain-containing protein
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | not expressed | 0.00 | 1.00 |
| Trophozoite | not expressed | 0.00 | 1.00 |
| Schizont | not expressed | 0.01 | 0.99 |
| Gametocyte | expressed | 0.25 | 0.85 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0805800
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: 1.661 | #Insertions: 2
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: A0A143ZVZ5
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 1 | 14 | 14 | 18 |
| disruptive | 18 | 32 | 22 | 47 |
| missense | 16 | 29 | 17 | 42 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 1 | 38 | 13 | 17 |
| disruptive | 26 | 87 | 42 | 107 |
| missense | 21 | 72 | 28 | 67 |
PlasmoDB Total SNPs: 25
Non-coding: 0 | Synonymous: 9 | Nonsynonymous: 15 | Stop Codon: 1
Protein Length: 436 | Molecular Weight (kDa): 53.172
UniProt ID(s): A0A143ZVZ5
PDB ID(s): None
Isoelectric Point: 9.76
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | IPR001715 | Calponin homology domain |
| InterPro | IPR036872 | CH domain superfamily |
| PFam | PF00307 | Calponin homology domain |
| Superfamily | SSF47576 | CH domain superfamily |
No associated publications