About Gene List

PF3D7_0806200 (DPY19)

Genome location: Pf3D7_08_v3:333,168..337,845(+)

Genome classification: Core

Function and Localization

Product Description: Dpy-19-like C-mannosyltransferase

SignalP Peptide: N/A

# Transmembrane Domains: 9

EC Numbers: 2.4.1.- (Hexosyltransferases.)

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0005783 endoplasmic reticulum
Component GO:0005637 nuclear inner membrane
Function GO:0000030 mannosyltransferase activity
Process GO:0035891 exit from host cell
Process GO:0097502 mannosylation
Process GO:0018103 protein C-linked glycosylation
Process GO:0018406 protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.01 0.99
Trophozoite not expressed 0.12 0.92
Schizont expressed 0.79 0.55
Gametocyte not expressed 0.43 0.76

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0806200

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 1 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 1 | MFS: -2.623 | #Insertions: 2

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: Not different from wild type (Pb ortholog: PBANKA_1224500)

Modification: Disrupted | RMgm-5209

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C0H4S1

"Best" AlphaFill ligand hit: CP6 (pyrimethamine, Local RMSD=8.43) with 3QGT (Global RMSD=16.95)

BRENDA EC Inhibitors:

EC # Name EC Inhibitors
2.4.1.- Ex: levansucrase KIATPADPUDPAMPGTPGDPCTPUTPKClNEMIMP...

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_107418

Most Similar Human Ortholog: Q2PZI1

TM-align score: 0.87 | RMSD: 2.64

Seq Identity: 0.23 | Length: 625 / 1018

All Human Orthologs (OrthoMCL):

Gene ID Description
ENSG00000173852 dpy-19 like C-mannosyltransferase 1
ENSG00000177990 dpy-19 like 2

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 13 30 33 46
disruptive 12 45 49 97
missense 8 43 42 80

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 17 88 40 55
disruptive 24 169 101 247
missense 14 122 78 129

PlasmoDB Total SNPs: 301

Non-coding: 207 | Synonymous: 77 | Nonsynonymous: 17 | Stop Codon: 0

Protein Information

Protein Length: 1018 | Molecular Weight (kDa): 122.106

UniProt ID(s): C0H4S1

PDB ID(s): None

Isoelectric Point: 9.57

Protein Domain Annotations:

Source Family ID Description
InterPro IPR018732 Dpy-19/Dpy-19-like
InterPro IPR030038 C-mannosyltransferase Dpy-19
PFam PF10034 Dpy-19/Dpy-19-like
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
29432542 Apicomplexan C-Mannosyltransferases Modify Thrombospondin Type I-containingAdhesins of the TRAP Family. Hoppe CM, Albuquerque-Wendt A, ..., Routier FH 10.1093/glycob/cwy013
31559936 A Plasmodium falciparum C-mannosyltransferase is dispensable for parasite asexualblood stage development. Lopez-Gutierrez B, Cova M, Izquierdo L 10.1017/S0031182019001380
35906227 Tryptophan C-mannosylation is critical for Plasmodium falciparum transmission. Lopaticki S, McConville R, ..., Boddey JA 10.1038/s41467-022-32076-8
31862733 C-Mannosylation of Toxoplasma gondii proteins promotes attachment to host cellsand parasite virulence Albuquerque-Wendt A, Jacot D, ..., Routier FH 10.1074/jbc.RA119.010590