Product Description: conserved protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 1
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0020011 | apicoplast |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.09 | 0.96 |
Trophozoite | possibly expressed | 0.41 | 0.75 |
Schizont | not expressed | 0.17 | 0.89 |
Gametocyte | not expressed | 0.28 | 0.83 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0806900
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.158 | MFS: -3.125 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_1223700)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: A0A143ZWH7
"Best" AlphaFill ligand hit: DCC (dodecyl-coa, Local RMSD=0.02) with 3ANP (Global RMSD=13.17)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 10 | 7 | 15 |
disruptive | 3 | 11 | 12 | 40 |
missense | 3 | 11 | 10 | 33 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 6 | 16 | 19 | 24 |
disruptive | 5 | 52 | 33 | 108 |
missense | 4 | 34 | 28 | 73 |
PlasmoDB Total SNPs: 83
Non-coding: 75 | Synonymous: 8 | Nonsynonymous: 0 | Stop Codon: 0
Protein Length: 379 | Molecular Weight (kDa): 45.155
UniProt ID(s): A0A143ZWH7
PDB ID(s): None
Isoelectric Point: 9.88
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
30212465 | Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. | Boucher MJ, Ghosh S, ..., Yeh E | 10.1371/journal.pbio.2005895 |