About Gene List

PF3D7_0810100

Genome location: Pf3D7_08_v3:519,144..520,724(-)

Genome classification: Core

Function and Localization

Product Description: ribosomal protein L33, apicoplast, putative

SignalP Peptide: N/A

# Transmembrane Domains: 1

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0020011 apicoplast
Component GO:0000311 plastid large ribosomal subunit
Function GO:0003735 structural constituent of ribosome
Process GO:0006412 translation

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.01 1.00
Trophozoite not expressed 0.09 0.93
Schizont possibly expressed 0.03 0.98
Gametocyte not expressed 0.07 0.95

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0810100

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS *tentative

MIS: 0.992 | MFS: 0 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C0H4T5

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_107404

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 0 0 0 0
disruptive 0 1 0 0
missense 0 0 0 0

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 0 0 0 1
disruptive 0 1 0 2
missense 0 0 0 0

PlasmoDB Total SNPs: 41

Non-coding: 38 | Synonymous: 2 | Nonsynonymous: 1 | Stop Codon: 0

Protein Information

Protein Length: 111 | Molecular Weight (kDa): 13.664

UniProt ID(s): C0H4T5

PDB ID(s): None

Isoelectric Point: 10.7

Protein Domain Annotations:

Source Family ID Description
InterPro IPR001705 Ribosomal protein L33
InterPro IPR011332 Zinc-binding ribosomal protein
PFam PF00471 Ribosomal protein L33
Superfamily SSF57829 Zinc-binding ribosomal protein

Associated Publications

PMID Title Authors DOI/Link
30212465 Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. Boucher MJ, Ghosh S, ..., Yeh E 10.1371/journal.pbio.2005895