Product Description: ribosomal protein L33, apicoplast, putative
SignalP Peptide: N/A
# Transmembrane Domains: 1
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0020011 | apicoplast |
Component | GO:0000311 | plastid large ribosomal subunit |
Function | GO:0003735 | structural constituent of ribosome |
Process | GO:0006412 | translation |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.01 | 1.00 |
Trophozoite | not expressed | 0.09 | 0.93 |
Schizont | possibly expressed | 0.03 | 0.98 |
Gametocyte | not expressed | 0.07 | 0.95 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0810100
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS *tentative
MIS: 0.992 | MFS: 0 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H4T5
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 0 | 0 | 0 | 0 |
disruptive | 0 | 1 | 0 | 0 |
missense | 0 | 0 | 0 | 0 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 0 | 0 | 0 | 1 |
disruptive | 0 | 1 | 0 | 2 |
missense | 0 | 0 | 0 | 0 |
PlasmoDB Total SNPs: 41
Non-coding: 38 | Synonymous: 2 | Nonsynonymous: 1 | Stop Codon: 0
Protein Length: 111 | Molecular Weight (kDa): 13.664
UniProt ID(s): C0H4T5
PDB ID(s): None
Isoelectric Point: 10.7
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR001705 | Ribosomal protein L33 |
InterPro | IPR011332 | Zinc-binding ribosomal protein |
PFam | PF00471 | Ribosomal protein L33 |
Superfamily | SSF57829 | Zinc-binding ribosomal protein |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
30212465 | Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. | Boucher MJ, Ghosh S, ..., Yeh E | 10.1371/journal.pbio.2005895 |