Product Description: conserved protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
| Type | GO Term | Name |
|---|---|---|
| Component | GO:0005634 | nucleus |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | expressed | N/A | N/A |
| Ring | expressed | 0.84 | 0.62 |
| Trophozoite | expressed | 1.29 | 0.38 |
| Schizont | expressed | 0.45 | 0.72 |
| Gametocyte | expressed | 0.42 | 0.77 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0811400
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.847 | MFS: -2.796 | #Insertions: 1
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1426100)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1426100)
Modification: Disrupted | RMgm-3865
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H4U0
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 4 | 14 | 7 | 19 |
| disruptive | 2 | 10 | 3 | 30 |
| missense | 2 | 10 | 3 | 27 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 6 | 29 | 18 | 27 |
| disruptive | 2 | 39 | 21 | 84 |
| missense | 2 | 26 | 17 | 55 |
PlasmoDB Total SNPs: 201
Non-coding: 182 | Synonymous: 16 | Nonsynonymous: 3 | Stop Codon: 0
Protein Length: 608 | Molecular Weight (kDa): 71.369
UniProt ID(s): C0H4U0
PDB ID(s): None
Isoelectric Point: 5.23
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | IPR018553 | Protein of unknown function DUF2009 |
| PFam | PF09418 | Protein of unknown function DUF2009 |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |
| 30379851 | Identification of Plasmodium falciparum nuclear proteins by mass spectrometry andproposed protein annotation. | Briquet S, Ourimi A, ..., Vaquero C | 10.1371/journal.pone.0205596 |