Product Description: protein MAP1, putative
SignalP Peptide: MNNVIIFLLLLINFGTKVYG
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
| Type | GO Term | Name |
|---|---|---|
| Component | GO:0009986 | cell surface |
| Component | GO:0005634 | nucleus |
| Component | GO:0005886 | plasma membrane |
| Function | GO:0003723 | RNA binding |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | not expressed | 0.11 | 0.95 |
| Trophozoite | not expressed | 0.42 | 0.76 |
| Schizont | expressed | 1.30 | 0.41 |
| Gametocyte | not expressed | 0.59 | 0.67 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0811600
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 1 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.128 | MFS: -3.136 | #Insertions: 0
PlasmoGEM Phenotype: Slow (Pb ortholog: PBANKA_1425900)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1425900)
Modification: Disrupted | RMgm-3863
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IAV1
"Best" AlphaFill ligand hit: UMP (2'-deoxyuridine 5'-monophosphate, Local RMSD=0.18) with 6A2L (Global RMSD=20.00)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 2 | 20 | 11 | 25 |
| disruptive | 14 | 27 | 22 | 68 |
| missense | 14 | 26 | 21 | 56 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 5 | 36 | 26 | 38 |
| disruptive | 24 | 59 | 51 | 130 |
| missense | 21 | 45 | 40 | 85 |
PlasmoDB Total SNPs: 270
Non-coding: 217 | Synonymous: 35 | Nonsynonymous: 18 | Stop Codon: 0
Protein Length: 1210 | Molecular Weight (kDa): 144.008
UniProt ID(s): Q8IAV1
PDB ID(s): None
Isoelectric Point: 7
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 30379851 | Identification of Plasmodium falciparum nuclear proteins by mass spectrometry andproposed protein annotation. | Briquet S, Ourimi A, ..., Vaquero C | 10.1371/journal.pone.0205596 |
| 33906926 | Functional Characterization of the m(6)A-Dependent Translational Modulator PfYTH | Sinha A, Baumgarten S, ..., Scherf A | 10.1128/mBio.00661-21 |