Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 2
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | expressed | N/A | N/A |
Ring | expressed | 1.02 | 0.54 |
Trophozoite | expressed | 0.45 | 0.74 |
Schizont | expressed | 0.62 | 0.62 |
Gametocyte | expressed | 0.46 | 0.74 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0820300
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -0.334 | #Insertions: 3
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0710500)
Modification: Disrupted | RMgm-2217
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IB38
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 5 | 39 | 20 | 37 |
disruptive | 46 | 130 | 83 | 143 |
missense | 39 | 114 | 72 | 121 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 11 | 73 | 30 | 41 |
disruptive | 90 | 263 | 104 | 199 |
missense | 60 | 226 | 83 | 126 |
PlasmoDB Total SNPs: 346
Non-coding: 222 | Synonymous: 72 | Nonsynonymous: 52 | Stop Codon: 0
Protein Length: 613 | Molecular Weight (kDa): 72.276
UniProt ID(s): Q8IB38
PDB ID(s): None
Isoelectric Point: 8.7
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |