Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.10 | 0.95 |
Trophozoite | not expressed | 0.14 | 0.92 |
Schizont | not expressed | 0.06 | 0.96 |
Gametocyte | not expressed | 1.20 | 0.43 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0822400
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.125 | MFS: -3.036 | #Insertions: 0
PlasmoGEM Phenotype: Slow (Pb ortholog: PBANKA_0708200)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0708200)
Modification: Disrupted | RMgm-2207
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H4W9
"Best" AlphaFill ligand hit: SAH (s-adenosyl-l-homocysteine, Local RMSD=0.05) with 6QE6 (Global RMSD=21.39)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 27 | 17 | 23 |
disruptive | 14 | 47 | 30 | 71 |
missense | 13 | 46 | 29 | 61 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 7 | 53 | 21 | 32 |
disruptive | 22 | 104 | 64 | 115 |
missense | 19 | 86 | 53 | 83 |
PlasmoDB Total SNPs: 117
Non-coding: 97 | Synonymous: 7 | Nonsynonymous: 13 | Stop Codon: 0
Protein Length: 486 | Molecular Weight (kDa): 58.407
UniProt ID(s): C0H4W9
PDB ID(s): None
Isoelectric Point: 7.17
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
No associated publications