Product Description: RWD domain-containing protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
| Type | GO Term | Name |
|---|---|---|
| Component | GO:0005844 | polysome |
| Process | GO:0002181 | cytoplasmic translation |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | not expressed | 0.24 | 0.88 |
| Trophozoite | not expressed | 0.26 | 0.85 |
| Schizont | not expressed | 0.03 | 0.98 |
| Gametocyte | not expressed | 0.10 | 0.94 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0823100
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -2.01 | #Insertions: 1
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H4X2
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_102929
Most Similar Human Ortholog: Q9H446
TM-align score: 0.52 | RMSD: 3.18
Seq Identity: 0.28 | Length: 137 / 229
All Human Orthologs (OrthoMCL):
| Gene ID | Description |
|---|---|
| ENSG00000111832 | RWD domain containing 1 |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 0 | 0 | 0 | 0 |
| disruptive | 0 | 0 | 0 | 0 |
| missense | 0 | 0 | 0 | 0 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 0 | 0 | 0 | 0 |
| disruptive | 0 | 0 | 0 | 2 |
| missense | 0 | 0 | 0 | 0 |
PlasmoDB Total SNPs: 161
Non-coding: 147 | Synonymous: 7 | Nonsynonymous: 7 | Stop Codon: 0
Protein Length: 229 | Molecular Weight (kDa): 27.395
UniProt ID(s): C0H4X2
PDB ID(s): None
Isoelectric Point: 4.02
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | IPR006575 | RWD domain |
| InterPro | IPR016135 | Ubiquitin-conjugating enzyme/RWD-like |
| InterPro | IPR040213 | GIR2-like |
| PFam | PF05773 | RWD domain |
| Superfamily | SSF54495 | Ubiquitin-conjugating enzyme/RWD-like |
No associated publications