About Gene List

PF3D7_0824200

Genome location: Pf3D7_08_v3:1,054,798..1,059,140(+)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring possibly expressed 0.10 0.95
Trophozoite expressed 0.70 0.61
Schizont expressed 0.08 0.95
Gametocyte expressed 0.42 0.76

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0824200

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 2 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.119 | MFS: -3.016 | #Insertions: 0

PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_0706400)

  • Relative Growth Rate: 0.03 ± 0.03
  • Confidence: 8.54

RMgmDB ABS Phenotype: Not tested (Pb ortholog: PBANKA_0706400)

Modification: Disrupted | RMgm-4147

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C0H4X4

"Best" AlphaFill ligand hit: PH2 (2-amino-6-hydroxymethyl-7,8-dihydro-3h-pteridin-4-one, Local RMSD=5.82) with 6JWY (Global RMSD=21.60)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_533253

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 8 49 23 63
disruptive 31 130 65 155
missense 20 94 51 134

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 16 105 37 67
disruptive 57 270 143 296
missense 35 190 114 194

PlasmoDB Total SNPs: 189

Non-coding: 83 | Synonymous: 73 | Nonsynonymous: 33 | Stop Codon: 0

Protein Information

Protein Length: 1124 | Molecular Weight (kDa): 133.806

UniProt ID(s): C0H4X4

PDB ID(s): None

Isoelectric Point: 5.8

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
16267556 A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, Vignali M, ..., Hughes RE 10.1038/nature04104