Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | possibly expressed | 0.10 | 0.95 |
Trophozoite | expressed | 0.70 | 0.61 |
Schizont | expressed | 0.08 | 0.95 |
Gametocyte | expressed | 0.42 | 0.76 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0824200
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 2 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.119 | MFS: -3.016 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_0706400)
RMgmDB ABS Phenotype: Not tested (Pb ortholog: PBANKA_0706400)
Modification: Disrupted | RMgm-4147
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H4X4
"Best" AlphaFill ligand hit: PH2 (2-amino-6-hydroxymethyl-7,8-dihydro-3h-pteridin-4-one, Local RMSD=5.82) with 6JWY (Global RMSD=21.60)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 8 | 49 | 23 | 63 |
disruptive | 31 | 130 | 65 | 155 |
missense | 20 | 94 | 51 | 134 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 16 | 105 | 37 | 67 |
disruptive | 57 | 270 | 143 | 296 |
missense | 35 | 190 | 114 | 194 |
PlasmoDB Total SNPs: 189
Non-coding: 83 | Synonymous: 73 | Nonsynonymous: 33 | Stop Codon: 0
Protein Length: 1124 | Molecular Weight (kDa): 133.806
UniProt ID(s): C0H4X4
PDB ID(s): None
Isoelectric Point: 5.8
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |