Genome location: Pf3D7_08_v3:1,324,597..1,331,626(+)
Genome classification: Core
Product Description: surface-associated interspersed protein 8.1 (SURFIN 8.1)
SignalP Peptide: N/A
# Transmembrane Domains: 1
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0009986 | cell surface |
Component | GO:0044228 | host cell surface |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | possibly expressed | N/A | N/A |
Ring | expressed | 0.06 | 0.97 |
Trophozoite | expressed | 0.05 | 0.98 |
Schizont | possibly expressed | 0.02 | 0.99 |
Gametocyte | possibly expressed | 0.27 | 0.85 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0831100
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -1.303 | #Insertions: 7
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H4Z4
"Best" AlphaFill ligand hit: IMP (inosinic acid, Local RMSD=0.09) with 6M9M (Global RMSD=15.82)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 16 | 38 | 17 | 52 |
disruptive | 99 | 255 | 99 | 238 |
missense | 83 | 203 | 79 | 174 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 21 | 68 | 25 | 45 |
disruptive | 159 | 409 | 124 | 227 |
missense | 122 | 310 | 99 | 166 |
PlasmoDB Total SNPs: 577
Non-coding: 161 | Synonymous: 155 | Nonsynonymous: 246 | Stop Codon: 15
Protein Length: 1921 | Molecular Weight (kDa): 236.183
UniProt ID(s): A0A2H4THN3, A0A2H4THP7, A0A2H4THU3, A0A348FV60, A0A348FV64, A0A348FV70, A0A348FV74, C0H4Z4
PDB ID(s): None
Isoelectric Point: 5.1
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR024288 | Schizont-infected cell agglutination, C-terminal domain |
PFam | PF12879 | Schizont-infected cell agglutination, C-terminal domain |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
15939796 | SURFIN is a polymorphic antigen expressed on Plasmodium falciparum merozoites andinfected erythrocytes. | Winter G, Kawai S, ..., Wahlgren M | 10.1084/jem.20041392 |