Product Description: conserved protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 6
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0016020 | membrane |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | possibly expressed | N/A | N/A |
Ring | not expressed | 0.13 | 0.94 |
Trophozoite | expressed | 1.16 | 0.52 |
Schizont | expressed | 1.40 | 0.49 |
Gametocyte | possibly expressed | 1.17 | 0.46 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0903300
Resistome Missense Mutations: I201K
Resistome Compounds with Missense Mutations: TCMDC-124553/MMV019869
Resistome # Samples with Disruptive Mutations: 1 (1 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.999 | MFS: -2.656 | #Insertions: 1
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0418100)
Modification: Disrupted | RMgm-1929
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 48 | 245 | 127 | 220 |
disruptive | 163 | 755 | 354 | 720 |
missense | 143 | 687 | 321 | 628 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 96 | 426 | 157 | 255 |
disruptive | 361 | 1444 | 517 | 1051 |
missense | 280 | 1236 | 429 | 619 |
PlasmoDB Total SNPs: 625
Non-coding: 221 | Synonymous: 216 | Nonsynonymous: 186 | Stop Codon: 2
Protein Length: 3203 | Molecular Weight (kDa): 380.982
UniProt ID(s): C0H517
PDB ID(s): None
Isoelectric Point: 9.59
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR011009 | Protein kinase-like domain superfamily |
PFam | N/A | N/A |
Superfamily | SSF56112 | Protein kinase-like domain superfamily |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
11152613 | Predicting transmembrane protein topology with a hidden Markov model: applicationto complete genomes. | Krogh A, Larsson B, von Heijne G, Sonnhammer EL | 10.1006/jmbi.2000.4315 |
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |
16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |