Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | expressed | 0.16 | 0.92 |
Trophozoite | expressed | 0.57 | 0.68 |
Schizont | possibly expressed | 0.07 | 0.96 |
Gametocyte | possibly expressed | 0.43 | 0.76 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0906800
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.165 | MFS: -3.22 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H522
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 8 | 51 | 24 | 62 |
disruptive | 41 | 130 | 102 | 203 |
missense | 28 | 116 | 93 | 172 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 14 | 94 | 35 | 71 |
disruptive | 75 | 312 | 150 | 262 |
missense | 47 | 253 | 122 | 185 |
PlasmoDB Total SNPs: 95
Non-coding: 23 | Synonymous: 40 | Nonsynonymous: 32 | Stop Codon: 0
Protein Length: 780 | Molecular Weight (kDa): 95.507
UniProt ID(s): C0H522
PDB ID(s): None
Isoelectric Point: 10.59
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |
16629662 | Regulation of protein phosphatase type 1 and cell cycle progression by PfLRR1, anovel leucine-rich repeat protein of the human malaria parasite Plasmodiumfalciparum. | Daher W, Browaeys E, ..., Khalife J | 10.1111/j.1365-2958.2006.05119.x |