Product Description: conserved protein, unknown function
SignalP Peptide: MIYWKLLLLFGTILIFLNKKNNV
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0020011 | apicoplast |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.25 | 0.88 |
Trophozoite | possibly expressed | 1.01 | 0.49 |
Schizont | possibly expressed | 0.34 | 0.80 |
Gametocyte | possibly expressed | 0.96 | 0.52 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0913700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.205 | MFS: -2.868 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_0814700)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8I315
"Best" AlphaFill ligand hit: ANP (phosphoaminophosphonic acid-adenylate ester, Local RMSD=0.90) with 8BNX (Global RMSD=14.45)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 7 | 36 | 17 | 36 |
disruptive | 21 | 37 | 18 | 53 |
missense | 11 | 34 | 16 | 44 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 12 | 56 | 30 | 29 |
disruptive | 31 | 94 | 40 | 109 |
missense | 15 | 77 | 35 | 74 |
PlasmoDB Total SNPs: 116
Non-coding: 21 | Synonymous: 31 | Nonsynonymous: 60 | Stop Codon: 4
Protein Length: 659 | Molecular Weight (kDa): 78.627
UniProt ID(s): Q8I315
PDB ID(s): None
Isoelectric Point: 8.78
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |
30212465 | Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. | Boucher MJ, Ghosh S, ..., Yeh E | 10.1371/journal.pbio.2005895 |