Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | possibly expressed | 1.01 | 0.56 |
Trophozoite | expressed | 1.02 | 0.49 |
Schizont | expressed | 0.64 | 0.65 |
Gametocyte | possibly expressed | 1.35 | 0.37 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0916400
Resistome Missense Mutations: K388Q
Resistome Compounds with Missense Mutations: BRD1095
Resistome # Samples with Disruptive Mutations: 2 (2 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.14 | MFS: -2.867 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H539
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 37 | 125 | 86 | 168 |
disruptive | 159 | 516 | 277 | 623 |
missense | 115 | 450 | 247 | 493 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 60 | 267 | 124 | 220 |
disruptive | 346 | 1177 | 429 | 1001 |
missense | 214 | 929 | 331 | 589 |
PlasmoDB Total SNPs: 471
Non-coding: 55 | Synonymous: 226 | Nonsynonymous: 187 | Stop Codon: 3
Protein Length: 2519 | Molecular Weight (kDa): 305.333
UniProt ID(s): C0H539
PDB ID(s): None
Isoelectric Point: 9.95
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |