Product Description: merozoite organizing protein
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0045177 | apical part of cell |
Component | GO:0000793 | condensed chromosome |
Component | GO:0000796 | condensin complex |
Process | GO:0051301 | cell division |
Process | GO:0007076 | mitotic chromosome condensation |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.08 | 0.96 |
Trophozoite | expressed | 0.65 | 0.64 |
Schizont | expressed | 0.77 | 0.57 |
Gametocyte | expressed | 0.43 | 0.75 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0917000
Resistome Missense Mutations: D847G
Resistome Compounds with Missense Mutations: MMV006901
Resistome # Samples with Disruptive Mutations: 5 (5 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.12 | MFS: -3.016 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_0818000)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8I2Y3
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 16 | 98 | 93 | 149 |
disruptive | 42 | 198 | 109 | 301 |
missense | 21 | 173 | 93 | 260 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 31 | 218 | 118 | 148 |
disruptive | 77 | 418 | 211 | 426 |
missense | 39 | 348 | 178 | 305 |
PlasmoDB Total SNPs: 199
Non-coding: 37 | Synonymous: 118 | Nonsynonymous: 44 | Stop Codon: 0
Protein Length: 1826 | Molecular Weight (kDa): 215.35
UniProt ID(s): Q8I2Y3
PDB ID(s): None
Isoelectric Point: 5.82
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR016024 | Armadillo-type fold |
InterPro | IPR027165 | Condensin complex subunit 3 |
PFam | N/A | N/A |
Superfamily | SSF48371 | Armadillo-type fold |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |
16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |
27121004 | An essential malaria protein defines the architecture of blood-stage andtransmission-stage parasites. | Absalon S, Robbins JA, Dvorin JD | 10.1038/ncomms11449 |
32049018 | Plasmodium Condensin Core Subunits SMC2/SMC4 Mediate Atypical Mitosis and AreEssential for Parasite Proliferation and Transmission. | Pandey R, Abel S, ..., Tewari R | 10.1016/j.celrep.2020.01.033 |