Product Description: cytochrome b5-like heme/steroid binding protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0043231 | intracellular membrane-bounded organelle |
Component | GO:0016020 | membrane |
Component | GO:0005634 | nucleus |
Function | GO:0009055 | electron transfer activity |
Function | GO:0020037 | heme binding |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | expressed | 0.69 | 0.69 |
Trophozoite | expressed | 0.44 | 0.75 |
Schizont | expressed | 1.02 | 0.49 |
Gametocyte | expressed | 0.61 | 0.67 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0918100
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS *tentative
MIS: 0.156 | MFS: -2.805 | #Insertions: 0
PlasmoGEM Phenotype: Slow (Pb ortholog: PBANKA_0819100)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0819100)
Modification: Disrupted | RMgm-2379
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H542
"Best" AlphaFill ligand hit: OCT (n-octane, Local RMSD=0.28) with 4PR7 (Global RMSD=18.90)
No associated EC numbersNo evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_102017
Most Similar Human Ortholog: A0A0A0MRM6
TM-align score: 0.78 | RMSD: 1.68
Seq Identity: 0.36 | Length: 95 / 130
All Human Orthologs (OrthoMCL):
Gene ID | Description |
---|---|
ENSG00000065615 | cytochrome b5 reductase 4 |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
No passing variants found
PlasmoDB Total SNPs: 238
Non-coding: 219 | Synonymous: 3 | Nonsynonymous: 16 | Stop Codon: 0
Protein Length: 130 | Molecular Weight (kDa): 15.223
UniProt ID(s): C0H542
PDB ID(s): None
Isoelectric Point: 9.89
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR001199 | Cytochrome b5-like heme/steroid binding domain |
InterPro | IPR018506 | Cytochrome b5, heme-binding site |
InterPro | IPR036400 | Cytochrome b5-like heme/steroid binding domain superfamily |
PFam | PF00173 | Cytochrome b5-like heme/steroid binding domain |
Superfamily | SSF55856 | Cytochrome b5-like heme/steroid binding domain superfamily |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |
23181666 | Organellar proteomics reveals hundreds of novel nuclear proteins in the malariaparasite Plasmodium falciparum. | Oehring SC, Woodcroft BJ, ..., Voss TS | 10.1186/gb-2012-13-11-r108 |