About Gene List

PF3D7_0919800

Genome location: Pf3D7_09_v3:803,743..808,112(-)

Genome classification: Core

Function and Localization

Product Description: TLD domain-containing protein

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0005634 nucleus

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite expressed N/A N/A
Ring expressed 0.54 0.75
Trophozoite expressed 0.81 0.58
Schizont expressed 1.12 0.45
Gametocyte expressed 0.93 0.51

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0919800

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 1 | MFS: -1.232 | #Insertions: 3

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8I2V5

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_100646

Most Similar Human Ortholog: E9PLW2

TM-align score: 0.92 | RMSD: 1.21

Seq Identity: 0.34 | Length: 115 / 1078

All Human Orthologs (OrthoMCL):

Gene ID Description
ENSG00000101342 TBC/LysM-associated domain containing 2
ENSG00000111912 nuclear receptor coactivator 7
ENSG00000164830 oxidation resistance 1

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 8 60 32 86
disruptive 78 190 95 227
missense 45 133 80 175

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 18 123 46 94
disruptive 135 381 145 302
missense 68 280 117 217

PlasmoDB Total SNPs: 279

Non-coding: 112 | Synonymous: 67 | Nonsynonymous: 98 | Stop Codon: 2

Protein Information

Protein Length: 1078 | Molecular Weight (kDa): 124.916

UniProt ID(s): Q8I2V5

PDB ID(s): None

Isoelectric Point: 6.95

Protein Domain Annotations:

Source Family ID Description
InterPro IPR006571 TLDc domain
PFam PF07534 TLDc domain
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095
16267556 A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, Vignali M, ..., Hughes RE 10.1038/nature04104
23181666 Organellar proteomics reveals hundreds of novel nuclear proteins in the malariaparasite Plasmodium falciparum. Oehring SC, Woodcroft BJ, ..., Voss TS 10.1186/gb-2012-13-11-r108