Product Description: patatin-like phospholipase, putative
SignalP Peptide: N/A
# Transmembrane Domains: 2
EC Numbers: 3.1.1.3 (Triacylglycerol lipase);3.1.1.4 (Phospholipase A(2))
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | expressed | N/A | N/A |
| Ring | expressed | 1.41 | 0.42 |
| Trophozoite | expressed | 0.95 | 0.51 |
| Schizont | expressed | 1.84 | 0.27 |
| Gametocyte | possibly expressed | 1.53 | 0.30 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0924000
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.942 | MFS: -2.847 | #Insertions: 1
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_0824900)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0824900)
Modification: Disrupted | RMgm-2412
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8I2R7
"Best" AlphaFill ligand hit: PGO (s-1,2-propanediol, Local RMSD=1.72) with 4KS6 (Global RMSD=15.19)
BRENDA EC Inhibitors:
No evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 14 | 72 | 45 | 75 |
| disruptive | 42 | 189 | 104 | 186 |
| missense | 32 | 137 | 88 | 145 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 25 | 135 | 59 | 87 |
| disruptive | 103 | 341 | 126 | 306 |
| missense | 60 | 251 | 99 | 220 |
PlasmoDB Total SNPs: 357
Non-coding: 215 | Synonymous: 68 | Nonsynonymous: 74 | Stop Codon: 0
Protein Length: 1292 | Molecular Weight (kDa): 151.451
UniProt ID(s): Q8I2R7
PDB ID(s): None
Isoelectric Point: 7.34
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | IPR002641 | Patatin-like phospholipase domain |
| InterPro | IPR016035 | Acyl transferase/acyl hydrolase/lysophospholipase |
| InterPro | IPR021771 | Triacylglycerol lipase |
| PFam | PF01734 | Patatin-like phospholipase domain |
| PFam | PF11815 | Triacylglycerol lipase |
| Superfamily | SSF52151 | Acyl transferase/acyl hydrolase/lysophospholipase |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |