About Gene List

PF3D7_0924000

Genome location: Pf3D7_09_v3:971,634..977,256(+)

Genome classification: Core

Function and Localization

Product Description: patatin-like phospholipase, putative

SignalP Peptide: N/A

# Transmembrane Domains: 2

EC Numbers: 3.1.1.3 (Triacylglycerol lipase);3.1.1.4 (Phospholipase A(2))

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite expressed N/A N/A
Ring expressed 1.41 0.42
Trophozoite expressed 0.95 0.51
Schizont expressed 1.84 0.27
Gametocyte possibly expressed 1.53 0.30

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0924000

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.942 | MFS: -2.847 | #Insertions: 1

PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_0824900)

  • Relative Growth Rate: 0.69 ± 0.32
  • Confidence: 3.67

RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0824900)

Modification: Disrupted | RMgm-2412

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8I2R7

"Best" AlphaFill ligand hit: PGO (s-1,2-propanediol, Local RMSD=1.72) with 4KS6 (Global RMSD=15.19)

BRENDA EC Inhibitors:

EC # Name EC Inhibitors
3.1.1.3 triacylglycerol lipase BRENDA SOAP query unsuccessful
3.1.1.4 phospholipase A2 BRENDA SOAP query unsuccessful

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_102894

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 14 72 45 75
disruptive 42 189 104 186
missense 32 137 88 145

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 25 135 59 87
disruptive 103 341 126 306
missense 60 251 99 220

PlasmoDB Total SNPs: 357

Non-coding: 215 | Synonymous: 68 | Nonsynonymous: 74 | Stop Codon: 0

Protein Information

Protein Length: 1292 | Molecular Weight (kDa): 151.451

UniProt ID(s): Q8I2R7

PDB ID(s): None

Isoelectric Point: 7.34

Protein Domain Annotations:

Source Family ID Description
InterPro IPR002641 Patatin-like phospholipase domain
InterPro IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase
InterPro IPR021771 Triacylglycerol lipase
PFam PF01734 Patatin-like phospholipase domain
PFam PF11815 Triacylglycerol lipase
Superfamily SSF52151 Acyl transferase/acyl hydrolase/lysophospholipase

Associated Publications

PMID Title Authors DOI/Link
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095