Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | expressed | N/A | N/A |
Ring | expressed | 0.85 | 0.65 |
Trophozoite | expressed | 0.75 | 0.59 |
Schizont | expressed | 1.06 | 0.49 |
Gametocyte | expressed | 1.16 | 0.43 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0924400
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: 1.908 | #Insertions: 5
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0825300)
Modification: Disrupted | RMgm-2414
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8I2R3
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 14 | 61 | 31 | 65 |
disruptive | 85 | 237 | 121 | 233 |
missense | 47 | 186 | 101 | 173 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 30 | 123 | 41 | 63 |
disruptive | 142 | 477 | 176 | 381 |
missense | 80 | 360 | 144 | 235 |
PlasmoDB Total SNPs: 395
Non-coding: 136 | Synonymous: 155 | Nonsynonymous: 104 | Stop Codon: 0
Protein Length: 1245 | Molecular Weight (kDa): 144.68
UniProt ID(s): Q8I2R3
PDB ID(s): None
Isoelectric Point: 6
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |
16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |