Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.06 | 0.97 |
Trophozoite | not expressed | 0.26 | 0.86 |
Schizont | expressed | 0.86 | 0.57 |
Gametocyte | expressed | 1.02 | 0.57 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0924600
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -2.069 | #Insertions: 5
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8I2R1
"Best" AlphaFill ligand hit: ABH (2(s)-amino-6-boronohexanoic acid, Local RMSD=0.52) with 3MMR (Global RMSD=16.01)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 12 | 78 | 58 | 134 |
disruptive | 75 | 289 | 195 | 423 |
missense | 43 | 255 | 179 | 378 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 18 | 173 | 89 | 169 |
disruptive | 143 | 635 | 338 | 553 |
missense | 78 | 540 | 287 | 419 |
PlasmoDB Total SNPs: 366
Non-coding: 115 | Synonymous: 139 | Nonsynonymous: 112 | Stop Codon: 0
Protein Length: 2082 | Molecular Weight (kDa): 247.155
UniProt ID(s): Q8I2R1
PDB ID(s): None
Isoelectric Point: 9.35
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |