Genome location: Pf3D7_09_v3:1,010,380..1,011,822(+)
Genome classification: Core
Product Description: alpha-tubulin N-acetyltransferase, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: 2.3.1.108 (Alpha-tubulin N-acetyltransferase)
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0005874 | microtubule |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.00 | 1.00 |
Trophozoite | not expressed | 0.01 | 1.00 |
Schizont | not expressed | 0.02 | 0.99 |
Gametocyte | possibly expressed | 0.22 | 0.87 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0924900
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.268 | MFS: -0.729 | #Insertions: 1
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
BRENDA EC Inhibitors:
EC # | Name | EC Inhibitors |
---|---|---|
2.3.1.108 | alpha-tubulin N-acetyltransferase | CoAColchicine |
No evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_103430
Most Similar Human Ortholog: Not available
TM-align score: 0.00 | RMSD: 0.00
Seq Identity: 0.00 | Length: / 184
All Human Orthologs (OrthoMCL):
Gene ID | Description |
---|---|
ENSG00000137343 | alpha tubulin acetyltransferase 1 |
ENSG00000206488 | alpha tubulin acetyltransferase 1 |
ENSG00000223752 | alpha tubulin acetyltransferase 1 |
ENSG00000229061 | alpha tubulin acetyltransferase 1 |
ENSG00000231257 | alpha tubulin acetyltransferase 1 |
ENSG00000234549 | alpha tubulin acetyltransferase 1 |
ENSG00000235658 | alpha tubulin acetyltransferase 1 |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 1 | 6 | 3 | 12 |
disruptive | 6 | 11 | 12 | 16 |
missense | 6 | 11 | 11 | 15 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 3 | 12 | 11 | 17 |
disruptive | 9 | 28 | 14 | 37 |
missense | 9 | 23 | 12 | 26 |
PlasmoDB Total SNPs: 119
Non-coding: 104 | Synonymous: 12 | Nonsynonymous: 3 | Stop Codon: 0
Protein Length: 184 | Molecular Weight (kDa): 21.835
UniProt ID(s): None
PDB ID(s): None
Isoelectric Point: 9.1
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR007965 | Gcn5-related N-acetyltransferase (GNAT) domain, ATAT-type |
InterPro | IPR016181 | Acyl-CoA N-acyltransferase |
InterPro | IPR038746 | Alpha-tubulin N-acetyltransferase |
PFam | PF05301 | Gcn5-related N-acetyltransferase (GNAT) domain, ATAT-type |
Superfamily | SSF55729 | Acyl-CoA N-acyltransferase |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |