Product Description: monocarboxylate transporter, putative
SignalP Peptide: N/A
# Transmembrane Domains: 11
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0020011 | apicoplast |
Component | GO:0016021 | integral component of membrane |
Component | GO:0016020 | membrane |
Function | GO:0008028 | monocarboxylic acid transmembrane transporter activity |
Process | GO:0015718 | monocarboxylic acid transport |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | possibly expressed | N/A | N/A |
Ring | expressed | 0.13 | 0.93 |
Trophozoite | expressed | 0.60 | 0.67 |
Schizont | expressed | 0.27 | 0.83 |
Gametocyte | expressed | 1.66 | 0.49 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0926400
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.983 | MFS: -2.835 | #Insertions: 1
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H564
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 5 | 21 | 19 | 43 |
disruptive | 7 | 32 | 23 | 80 |
missense | 7 | 31 | 22 | 75 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 8 | 58 | 27 | 44 |
disruptive | 14 | 95 | 62 | 135 |
missense | 10 | 83 | 50 | 104 |
PlasmoDB Total SNPs: 149
Non-coding: 124 | Synonymous: 17 | Nonsynonymous: 8 | Stop Codon: 0
Protein Length: 529 | Molecular Weight (kDa): 60.708
UniProt ID(s): C0H564
PDB ID(s): None
Isoelectric Point: 9.22
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR011701 | Major facilitator superfamily |
InterPro | IPR036259 | MFS transporter superfamily |
PFam | PF07690 | Major facilitator superfamily |
Superfamily | SSF103473 | MFS transporter superfamily |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
11152613 | Predicting transmembrane protein topology with a hidden Markov model: applicationto complete genomes. | Krogh A, Larsson B, von Heijne G, Sonnhammer EL | 10.1006/jmbi.2000.4315 |
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |
30212465 | Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. | Boucher MJ, Ghosh S, ..., Yeh E | 10.1371/journal.pbio.2005895 |