About Gene List

PF3D7_0926400

Genome location: Pf3D7_09_v3:1,070,433..1,073,592(-)

Genome classification: Core

Function and Localization

Product Description: monocarboxylate transporter, putative

SignalP Peptide: N/A

# Transmembrane Domains: 11

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0020011 apicoplast
Component GO:0016021 integral component of membrane
Component GO:0016020 membrane
Function GO:0008028 monocarboxylic acid transmembrane transporter activity
Process GO:0015718 monocarboxylic acid transport

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite possibly expressed N/A N/A
Ring expressed 0.13 0.93
Trophozoite expressed 0.60 0.67
Schizont expressed 0.27 0.83
Gametocyte expressed 1.66 0.49

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0926400

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.983 | MFS: -2.835 | #Insertions: 1

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C0H564

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_105412

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 5 21 19 43
disruptive 7 32 23 80
missense 7 31 22 75

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 8 58 27 44
disruptive 14 95 62 135
missense 10 83 50 104

PlasmoDB Total SNPs: 149

Non-coding: 124 | Synonymous: 17 | Nonsynonymous: 8 | Stop Codon: 0

Protein Information

Protein Length: 529 | Molecular Weight (kDa): 60.708

UniProt ID(s): C0H564

PDB ID(s): None

Isoelectric Point: 9.22

Protein Domain Annotations:

Source Family ID Description
InterPro IPR011701 Major facilitator superfamily
InterPro IPR036259 MFS transporter superfamily
PFam PF07690 Major facilitator superfamily
Superfamily SSF103473 MFS transporter superfamily

Associated Publications

PMID Title Authors DOI/Link
11152613 Predicting transmembrane protein topology with a hidden Markov model: applicationto complete genomes. Krogh A, Larsson B, von Heijne G, Sonnhammer EL 10.1006/jmbi.2000.4315
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095
30212465 Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. Boucher MJ, Ghosh S, ..., Yeh E 10.1371/journal.pbio.2005895