Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.08 | 0.96 |
Trophozoite | possibly expressed | 0.47 | 0.73 |
Schizont | not expressed | 0.13 | 0.92 |
Gametocyte | not expressed | 0.48 | 0.73 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0928700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.123 | MFS: -3.029 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8I2M2
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_117036
Most Similar Human Ortholog: Q5HY64
TM-align score: 0.27 | RMSD: 8.00
Seq Identity: 0.05 | Length: 406 / 1501
All Human Orthologs (OrthoMCL):
Gene ID | Description |
---|---|
ENSG00000198173 | family with sequence similarity 47 member C |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 12 | 73 | 32 | 83 |
disruptive | 65 | 252 | 125 | 252 |
missense | 36 | 185 | 112 | 224 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 23 | 127 | 48 | 94 |
disruptive | 136 | 461 | 192 | 390 |
missense | 66 | 362 | 171 | 279 |
PlasmoDB Total SNPs: 280
Non-coding: 103 | Synonymous: 93 | Nonsynonymous: 84 | Stop Codon: 0
Protein Length: 1501 | Molecular Weight (kDa): 181.363
UniProt ID(s): Q8I2M2
PDB ID(s): None
Isoelectric Point: 8.34
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |