Product Description: PIH1 domain-containing protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | possibly expressed | 0.01 | 0.99 |
Trophozoite | not expressed | 0.06 | 0.97 |
Schizont | possibly expressed | 0.05 | 0.97 |
Gametocyte | possibly expressed | 0.37 | 0.81 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0931700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -0.358 | #Insertions: 2
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_0832500)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0832500)
Modification: Disrupted | RMgm-2450
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H581
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_105060
Most Similar Human Ortholog: Q9NVR5
TM-align score: 0.27 | RMSD: 7.37
Seq Identity: 0.07 | Length: 274 / 715
All Human Orthologs (OrthoMCL):
Gene ID | Description |
---|---|
ENSG00000165506 | dynein axonemal assembly factor 2 |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 5 | 30 | 16 | 43 |
disruptive | 19 | 81 | 43 | 105 |
missense | 10 | 73 | 36 | 95 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 9 | 57 | 34 | 35 |
disruptive | 33 | 175 | 64 | 170 |
missense | 21 | 147 | 54 | 133 |
PlasmoDB Total SNPs: 141
Non-coding: 57 | Synonymous: 42 | Nonsynonymous: 39 | Stop Codon: 3
Protein Length: 715 | Molecular Weight (kDa): 85.234
UniProt ID(s): C0H581
PDB ID(s): None
Isoelectric Point: 5.15
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR012981 | PIH1, N-terminal |
PFam | PF08190 | PIH1, N-terminal |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |