Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 2
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | no data | N/A | N/A |
Ring | no data | 0.06 | 0.97 |
Trophozoite | no data | 0.19 | 0.89 |
Schizont | no data | 0.04 | 0.98 |
Gametocyte | no data | 0.25 | 0.85 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0932700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.991 | MFS: -2.437 | #Insertions: 2
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8I2I9
"Best" AlphaFill ligand hit: AN2 (amp phosphoramidate, Local RMSD=3.53) with 3IED (Global RMSD=15.97)
No associated EC numbersNo evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_106130
Most Similar Human Ortholog: H7C1S4
TM-align score: 0.47 | RMSD: 2.70
Seq Identity: 0.09 | Length: 55 / 1236
All Human Orthologs (OrthoMCL):
Gene ID | Description |
---|---|
ENSG00000159140 | SON DNA and RNA binding protein |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 8 | 43 | 27 | 60 |
disruptive | 44 | 165 | 97 | 191 |
missense | 25 | 139 | 83 | 172 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 13 | 86 | 45 | 79 |
disruptive | 88 | 309 | 142 | 283 |
missense | 56 | 252 | 113 | 195 |
PlasmoDB Total SNPs: 198
Non-coding: 12 | Synonymous: 116 | Nonsynonymous: 69 | Stop Codon: 1
Protein Length: 1236 | Molecular Weight (kDa): 149.809
UniProt ID(s): Q8I2I9
PDB ID(s): None
Isoelectric Point: 9.59
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |