About Gene List

PF3D7_0932700

Genome location: Pf3D7_09_v3:1,298,749..1,302,703(-)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 2

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite no data N/A N/A
Ring no data 0.06 0.97
Trophozoite no data 0.19 0.89
Schizont no data 0.04 0.98
Gametocyte no data 0.25 0.85

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_0932700

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.991 | MFS: -2.437 | #Insertions: 2

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8I2I9

"Best" AlphaFill ligand hit: AN2 (amp phosphoramidate, Local RMSD=3.53) with 3IED (Global RMSD=15.97)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_106130

Most Similar Human Ortholog: H7C1S4

TM-align score: 0.47 | RMSD: 2.70

Seq Identity: 0.09 | Length: 55 / 1236

All Human Orthologs (OrthoMCL):

Gene ID Description
ENSG00000159140 SON DNA and RNA binding protein

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 8 43 27 60
disruptive 44 165 97 191
missense 25 139 83 172

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 13 86 45 79
disruptive 88 309 142 283
missense 56 252 113 195

PlasmoDB Total SNPs: 198

Non-coding: 12 | Synonymous: 116 | Nonsynonymous: 69 | Stop Codon: 1

Protein Information

Protein Length: 1236 | Molecular Weight (kDa): 149.809

UniProt ID(s): Q8I2I9

PDB ID(s): None

Isoelectric Point: 9.59

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368867 Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, Pain A, ..., Barrell BG 10.1038/nature01095