Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 2
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | possibly expressed | N/A | N/A |
Ring | not expressed | 0.05 | 0.98 |
Trophozoite | expressed | 0.43 | 0.74 |
Schizont | expressed | 0.07 | 0.95 |
Gametocyte | expressed | 0.43 | 0.76 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_0933400
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.935 | MFS: -2.94 | #Insertions: 2
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H588
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 1 | 14 | 6 | 8 |
disruptive | 3 | 14 | 10 | 31 |
missense | 3 | 14 | 10 | 27 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 1 | 21 | 7 | 20 |
disruptive | 6 | 38 | 36 | 49 |
missense | 4 | 30 | 34 | 41 |
PlasmoDB Total SNPs: 38
Non-coding: 27 | Synonymous: 9 | Nonsynonymous: 2 | Stop Codon: 0
Protein Length: 268 | Molecular Weight (kDa): 32.015
UniProt ID(s): C0H588
PDB ID(s): None
Isoelectric Point: 10.47
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368867 | Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. | Hall N, Pain A, ..., Barrell BG | 10.1038/nature01095 |