Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | possibly expressed | 0.19 | 0.90 |
| Trophozoite | expressed | 0.33 | 0.79 |
| Schizont | possibly expressed | 0.23 | 0.84 |
| Gametocyte | not expressed | 0.33 | 0.81 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1007500
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: 0.637 | #Insertions: 5
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1205700)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1205700)
Modification: Disrupted | RMgm-3191
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C6S3C5
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 0 | 1 | 2 | 5 |
| disruptive | 1 | 19 | 9 | 22 |
| missense | 1 | 17 | 7 | 19 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 1 | 2 | 6 | 5 |
| disruptive | 4 | 47 | 17 | 36 |
| missense | 2 | 40 | 14 | 22 |
PlasmoDB Total SNPs: 48
Non-coding: 34 | Synonymous: 11 | Nonsynonymous: 3 | Stop Codon: 0
Protein Length: 108 | Molecular Weight (kDa): 13.023
UniProt ID(s): C6S3C5
PDB ID(s): None
Isoelectric Point: 6.49
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |