Product Description: conserved Plasmodium membrane protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 5
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | expressed | N/A | N/A |
Ring | expressed | 0.81 | 0.63 |
Trophozoite | expressed | 0.60 | 0.66 |
Schizont | expressed | 0.37 | 0.77 |
Gametocyte | expressed | 0.73 | 0.60 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1009800
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.119 | MFS: -3.023 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_1208100)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IJU7
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 16 | 71 | 48 | 88 |
disruptive | 82 | 226 | 138 | 322 |
missense | 55 | 195 | 123 | 280 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 31 | 147 | 65 | 101 |
disruptive | 146 | 508 | 217 | 431 |
missense | 96 | 425 | 162 | 288 |
PlasmoDB Total SNPs: 308
Non-coding: 122 | Synonymous: 70 | Nonsynonymous: 114 | Stop Codon: 2
Protein Length: 1345 | Molecular Weight (kDa): 162.366
UniProt ID(s): Q8IJU7
PDB ID(s): None
Isoelectric Point: 8.64
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |