About Gene List

PF3D7_1009800

Genome location: Pf3D7_10_v3:393,189..398,429(-)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium membrane protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 5

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite expressed N/A N/A
Ring expressed 0.81 0.63
Trophozoite expressed 0.60 0.66
Schizont expressed 0.37 0.77
Gametocyte expressed 0.73 0.60

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1009800

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.119 | MFS: -3.023 | #Insertions: 0

PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_1208100)

  • Relative Growth Rate: 0.08 ± 0.14
  • Confidence: 5.33

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IJU7

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_533477

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 16 71 48 88
disruptive 82 226 138 322
missense 55 195 123 280

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 31 147 65 101
disruptive 146 508 217 431
missense 96 425 162 288

PlasmoDB Total SNPs: 308

Non-coding: 122 | Synonymous: 70 | Nonsynonymous: 114 | Stop Codon: 2

Protein Information

Protein Length: 1345 | Molecular Weight (kDa): 162.366

UniProt ID(s): Q8IJU7

PDB ID(s): None

Isoelectric Point: 8.64

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097